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Malaria Vector Selection Atlas — *Anopheles gambiae* complex - Home
  • Malaria Vector Selection Atlas — Anopheles gambiae complex

Selection alerts

  • Insecticide resistance alerts
    • Alert SA-AGAM-01 (Vgsc)
    • Alert SA-AGAM-02 (Ace1)
    • Alert SA-AGAM-03 (Rdl)
    • Alert SA-AGAM-04 (Cyp6aa/Cyp6p)
    • Alert SA-AGAM-05 (Cyp9k1)
    • Alert SA-AGAM-06 (Gste)
    • Alert SA-AGAM-07 (Coeae1f/Coeae2f)
    • Alert SA-AGAM-08 (Keap1)
    • Alert SA-AGAM-09 (Dgk)

By chromosome

  • Chromosome 2RL
  • Chromosome 3RL
  • Chromosome X

By country

  • Angola
    • Angola / Luanda / coluzzii / 2009 / Q2
  • Burkina Faso
    • Burkina Faso / Comoe / coluzzii / 2011
    • Burkina Faso / Comoe / coluzzii / 2012
    • Burkina Faso / Comoe / coluzzii / 2015
    • Burkina Faso / Comoe / coluzzii / 2016
    • Burkina Faso / Houet / coluzzii / 2012 / Q3
    • Burkina Faso / Houet / coluzzii / 2014 / Q3
    • Burkina Faso / Houet / gambiae / 2012 / Q3
    • Burkina Faso / Houet / gambiae / 2014 / Q3
  • Benin
    • Benin / Djougou / coluzzii / 2017 / Q2
    • Benin / Djougou / gambiae / 2017 / Q2
    • Benin / Djougou / gambiae / 2017 / Q3
    • Benin / Avrankou / coluzzii / 2017 / Q3
  • Democratic Republic of the Congo
    • Democratic Republic of the Congo / Gbadolite / gambiae / 2015 / Q3
  • Central African Republic
    • Central African Republic / Bangui / gambiae / 1994 / Q1
  • Cote d’Ivoire
    • Cote d’Ivoire / Sud-Comoe / gambiae / 2017 / Q3
    • Cote d’Ivoire / Agneby-Tiassa / coluzzii / 2012
  • Cameroon
    • Cameroon / Mayo-Kani / gambiae / 2005
    • Cameroon / Haut-Nyong / gambiae / 2009 / Q3
    • Cameroon / Lom-Et-Djerem / gambiae / 2009 / Q3
  • Gabon
    • Gabon / Libreville / gambiae / 2000 / Q4
  • Ghana
    • Ghana / Ablekuma Central Municipal / coluzzii / 2018 / Q1
    • Ghana / La-Nkwantanang-Madina / gambiae / 2017 / Q4
    • Ghana / Adansi Akrofuom / coluzzii / 2018 / Q4
    • Ghana / Adansi South / coluzzii / 2018 / Q4
    • Ghana / Adansi South / gambiae / 2018 / Q4
    • Ghana / Amansie Central / coluzzii / 2018 / Q4
    • Ghana / Bekwai Municipal / coluzzii / 2018 / Q4
    • Ghana / Twifo Atti-Morkwa / coluzzii / 2012 / Q3
    • Ghana / Upper Denkyira East Municipal / coluzzii / 2018 / Q4
    • Ghana / Upper Denkyira West / coluzzii / 2018 / Q4
    • Ghana / New Juaben South Municipal / gambiae / 2012 / Q4
    • Ghana / Effia Kwesimintsim Municipal / coluzzii / 2012 / Q3
  • Gambia, The
    • Gambia, The / Lower Fuladu West / coluzzii / 2012 / Q4
    • Gambia, The / Central Badibu / bissau / 2011 / Q3
  • Guinea
    • Guinea / Kissidougou / gambiae / 2012 / Q4
    • Guinea / Macenta / gambiae / 2012 / Q4
  • Guinea-Bissau
    • Guinea-Bissau / Setor De Safim / bissau / 2010
    • Guinea-Bissau / Bissau Autonomous Sector / bissau / 2010
  • Mali
    • Mali / Kangaba / gambiae / 2004 / Q3
    • Mali / Kati / coluzzii / 2014 / Q3
    • Mali / Kati / gambiae / 2014 / Q3
    • Mali / Yanfolila / coluzzii / 2012 / Q4
    • Mali / Yanfolila / gambiae / 2012 / Q4
    • Mali / Bla / coluzzii / 2004 / Q3
  • Malawi
    • Malawi / Chikwawa / arabiensis / 2015 / Q2
  • Mozambique
    • Mozambique / Morrumbene / gambiae / 2004 / Q1
    • Mozambique / Morrumbene / gambiae / 2004 / Q2
  • Togo
    • Togo / Lome Commune / gambiae / 2017 / Q4
  • Tanzania
    • Tanzania / Muleba / arabiensis / 2015 / Q1
    • Tanzania / Muleba / arabiensis / 2015 / Q2
    • Tanzania / Muleba / gambiae / 2015 / Q2
    • Tanzania / Tarime / arabiensis / 2012 / Q3
    • Tanzania / Muheza / gambiae / 2013 / Q1
    • Tanzania / Moshi / arabiensis / 2012 / Q3
  • Uganda
    • Uganda / Kalangala / gambiae / 2015 / Q2
    • Uganda / Busia / gambiae / 2016 / Q2
    • Uganda / Mayuge / gambiae / 2017 / Q2
    • Uganda / Tororo / arabiensis / 2012 / Q4
    • Uganda / Tororo / gambiae / 2012 / Q4
    • Uganda / Kanungu / gambiae / 2012 / Q4

About

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Index

A | C | G | H | I | M | R | S | V

A

  • Anopheles gambiae species complex

C

  • CNV
  • cohort
  • copy number variation

G

  • G123
  • gene
  • genome
  • genome region
  • genome-wide selection scan
  • GWSS

H

  • H12
  • haplotype

I

  • IHS
  • insecticide resistance
  • integrated haplotype score
  • IR

M

  • malaria vector
  • Malaria Vector Genome Observatory
  • MalariaGEN Python API

R

  • recent positive selection
  • reference genome

S

  • selection
  • selection signal
  • single nucleotide polymorphism
  • SNP

V

  • vector control

By Selection Atlas contributors, Wellcome Sanger Institute Genomic Surveillance Unit, Liverpool School of Tropical Medicine Vector Informatics and Genomics Group.

© Copyright 2025.

The Malaria Vector Selection Atlas is licensed under CC BY 4.0

Citation: Sanjay Nagi, Alistair Miles et al. (2025) An atlas of recent positive selection in major African malaria vectors. In prep.

GWSS analysis version ─ agam/2025.03.05. Site version ─ v2025.03.27-1 (27 March 2025). See also release notes.